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Shopify Inventory Audit: How to Count and Reconcile Stock
Last updated: August 25, 2026
hopify Inventory Audit: How to Count and Reconcile Stock
By Rahim Badsa
·
August 25, 2026
·
8 min read
Inventory discrepancies cost money. Here's how to audit your Shopify inventory and fix mismatches.
Signs You Need an Audit
- Customers ordering out-of-stock items
- Physical counts don't match Shopify numbers
- Unexplained inventory shrinkage
- After receiving a large shipment
Step-by-Step Audit Process
- Freeze inventory changes during count
- Count by location (shelf by shelf)
- Use barcode scanning for accuracy
- Compare physical count to Shopify records
- Investigate discrepancies
- Adjust inventory in Shopify
- Document causes and prevent recurrence
Preventing Future Discrepancies
- Use POs for every incoming shipment
- Receive inventory against POs (not standalone)
- Conduct weekly cycle counts on A-items
- Track shrinkage by location
PODesk tracks receiving against POs to prevent discrepancies.
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